Journal: Medical physics

Article Title: Automated mammographic breast density estimation using a fully convolutional network

doi: 10.1002/mp.12763

Figure Lengend Snippet: Two undergrad research assistants delineated the breast area on mammograms using a GUI program in MATLAB. Created breast ground truth masks include only the breast area, removing the pectoral muscle, as shown in the right image, and/or belly tissue, as shown in the left image.

Article Snippet: Using a computer Graphic User Interface (GUI) tool in MATLAB (Mathworks, MA), two undergraduate student research assistants delineated the breast areas on mammograms in the dataset of this study ( ).

Techniques:

Journal: Medical physics

Article Title: Automated mammographic breast density estimation using a fully convolutional network

doi: 10.1002/mp.12763

Figure Lengend Snippet: Two undergrad research assistants delineated the breast area on mammograms using a GUI program in MATLAB. Created breast ground truth masks include only the breast area, removing the pectoral muscle, as shown in the right image, and/or belly tissue, as shown in the left image.

Article Snippet: We removed any non-breast areas, such as the pectoral muscle and/or belly tissue, from the resulting ground truth mask for the breast area. fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window Figure 1. caption a7 Two undergrad research assistants delineated the breast area on mammograms using a GUI program in MATLAB.

Techniques:

Journal: Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association

Article Title: Use of Analytic Morphomics of Liver, Spleen, and Body Composition to Identify Patients at Risk for Cirrhosis

doi: 10.1016/j.cgh.2014.07.042

Figure Lengend Snippet: (A) Example of identification of spinal vertebral levels that serve as anatomic reference system for each patient. (B) Example of fascial envelope (yellow line) and skin outline (red line) that are generated for each patient. (C) Example of the paraspinus muscles (outlined in yellow) defined automatically after delineation of paraspinus lateral seams at specified vertebra points that is processed in each patient. (D) Example of MATLAB based 3-D image viewer graphical user interface (GUI) generated for each segmented liver.

Article Snippet: For quality assurance, each de-identified scan was further visualized by another researcher to ensure that the outlines of organs and components were correct. fig ft0 fig mode=article f1 fig/graphic|fig/alternatives/graphic mode="anchored" m1 Open in a separate window Figure 1. caption a7 ( A ) Example of identification of spinal vertebral levels that serve as anatomic reference system for each patient. ( B ) Example of fascial envelope ( yellow line ) and skin outline ( red line ) that are generated for each patient. ( C ) Example of the paraspinus muscles ( outlined in yellow ) defined automatically after delineation of paraspinus lateral seams at specified vertebra points that is processed in each patient. ( D ) Example of MATLAB based 3-D image viewer graphical user interface (GUI) generated for each segmented liver.

Techniques: Generated, Muscles